We investigate whether and how LLMs encode goals: internal neural representations that precede and guide action, and that are flexible enough to be realized through many different execution paths. We construct a coding setting with multiple sub-tasks that allows us to evaluate goal-seeking behavior and the selection of sub-goals. In this setting, we localize an encoding of the next sub-goal in the outputs of a sparse set of attention heads. The same heads can be used to decode the LM's future actions in natural language (e.g., "I'm checking if a word is a palindrome"). We verify that this encoding is causal for next action and is plastic: transplanting it into a different environment, e.g., another programming language, triggers the same operation realized with a different sequence of tokens. The LM also sustains the encoding throughout the action's execution, which is puzzling because a transformer LM without recurrence cannot carry a state forward for more tokens than it has layers left. We propose that it does not need to. Under a non-recurrent goal-seeking (NRGS) account, the LM frequently re-reads the goal from the task specification, compares it with the progress visible in the growing context, and pursues what remains. We test the predictions of this account with targeted causal interventions.
https://arxiv.org/abs/2611.17297
We propose Synthesis Smuggling, a novel threat model in which an adversarial LLM infers sensitive information about a user from routine assistance-seeking interactions and steganographically encodes that into innocuous-looking model-generated content. The user may then unknowingly transmit that information by sharing the generated artifact, say as an email, social-media post, or message, through ordinary communication channels. An adversary monitoring these channels can discover this information. We demonstrate this threat by training two open-weight models to infer gender and age-group labels from conversational cues and encode their predictions using invisible characters or word choices. These results show that user-shared model outputs can become a covert channel for personal inferences, even when the model itself has no direct means of contacting an adversary.
https://arxiv.org/abs/2611.17280
Embodied foundation models hinge on diverse robot interaction data, which are costly to collect. Egocentric human videos offer a complementary source of experience, and latent action models (LAMs) provide a popular means of leveraging these videos for policy supervision. Compared with world-action models (WAMs), LAMs can offer greater training efficiency and potentially lower inference costs by avoiding explicit pixel prediction during policy learning and execution. However, most existing LAMs learn latent actions solely through video reconstruction, which can cause their representations to cluster by visual appearance rather than by the underlying actions. As a result, they struggle to align human actions with their robot counterparts. To bridge the gap, we introduce SALA, which emphasizes establishing the semantic correspondence for latent actions. Without requiring paired data, we use the language descriptions of unpaired human and robot clips to estimate semantic similarities and supervise cross-embodiment correspondence. Specifically, we translate these similarities into soft neighborhood structures that guide human latent actions toward semantically related robot latents, while robot action reconstruction grounds the latent space in control. The resulting shared latent action space provides a unified supervision signal for training an embodied foundation model on both human and robot videos. Notably, latent action supervision enables scaling along two axes: (1) pre-training on increasing amounts of general human video consistently reduces robot action prediction error on downstream tasks, and (2) post-training on increasing amounts of task-specific human video substantially improves real-world robot task success rates.
https://arxiv.org/abs/2611.17110
Vision transformers (ViTs) serve as the backbone for countless vision tasks, including dense prediction tasks, such as segmentation and depth estimation, even though the quadratic complexity of self-attention severely limits feature resolution and induces spatial artifacts. In this work, we introduce ElasticDino, a lightweight adapter which produces high-resolution feature maps, adhering to the fine details of the input image. As a key insight, we observe the consistency of artifacts across channels, and simultaneously resolve them to match the input image structure. Using a slim architecture based on spatial deformations, ElasticDino produces pixel-aligned, high-resolution feature maps efficiently. Leveraging deformations allows strictly preserving sharp semantics, and thereby avoiding the smoothness biases inherent to alternative approaches. Due to the absence of ground truth, we employ pixel-level semantic segmentation and depth estimation with linear heads to predict a set of downstream dense tasks, guiding the deformation process without leaking task-specific semantics into the model. We demonstrate superior accuracy over current methods on a range of popular dense task benchmarks, with better computational performance.
https://arxiv.org/abs/2611.16984
Public health agencies need to anticipate how outbreaks will unfold, when they will peak, and how long demand on health services will remain elevated. We previously developed a foundation model, Mantis, which was trained entirely on simulated outbreaks---enabling us to generate the diversity and scale of training data needed to support forecasting across diseases. However, our previous work left unresolved when simulation improves predictions and how it should complement observational data. Here, we varied the balance of simulated and observed training data while holding forecasting tasks fixed and varying the available surveillance history. We found that simulation-rich training was particularly valuable with limited local history, and its relative advantage diminished as more observations became available. We also found that simulation-based training reduced exceptionally large forecast errors, suggesting that mechanistic knowledge can help compensate for limited local evidence. Building on these findings, we developed Mantis 2, which combines simulated and observational training to jointly forecast up to six variables sixteen weeks ahead. Across 30 forecasting tasks, Mantis 2 achieved the best aggregate probabilistic accuracy over short, medium, and long horizons among the machine learning, statistical, and baseline models evaluated. It missed roughly 30\% fewer outbreak peaks than the strongest comparison model, with successfully anticipated peaks identified more than six weeks in advance on average. We publicly release Mantis 2, enabling public health agencies and researchers to forecast disease outcomes without developing a separate model for each disease or location.
https://arxiv.org/abs/2611.16935
Protein language models (pLMs) produce highly accurate contact maps from single-sequence inputs. People often take this accuracy as proof that these models implicitly learn invariant coevolutionary statistics, extracting the same signals as classical alignment-based methods like Potts. In this work, we introduce a diagnostic framework around a global bijective relabeling of the amino-acid alphabet. This transformation permutes residue letters while leaving all alignment-level information, column entropies, and pairwise edit distances unchanged. Pseudolikelihood Potts models and inverse-covariance estimators remain invariant under this transformation, but pLMs fail the test. Across multiple architectures (ESM-2, MSA Transformer, AMPLIFY) and model scales (8M to 3B parameters), pLM contact maps collapse under arbitrary relabeling. Using Hamming distance controls and biochemical grouping interventions, we attempt to isolate what likely causes this degradation and find that these models rely on explicit, canonical residue identities (``alphabet anchoring'') rather than pure coevolutionary statistics. Increasing scale makes models more responsive to biochemical classes, but their performance still degrades under relabeling. Our findings show a gap between how pLMs and classical coevolutionary models compute contacts. More broadly, our work shows how diagnostic perturbations that leave classical models provably unchanged can expose hidden representation biases and prevent over-reliance on neural black boxes in biological modeling.
https://arxiv.org/abs/2611.16881
Environmental, Social and Governance (ESG) scores are increasingly used to evaluate corporate sustainability, supporting investment decisions, ensuring regulatory compliance and assessing risk. However, current ESG evaluations largely rely on proprietary methodologies that often produce inconsistent ratings. This motivates the development of data-driven prediction frameworks. In this paper, we present ESGPred, a modular framework for predicting ESG scores by combining domain-specific language modeling with graph-based learning over a network that models the relationships among the companies being evaluated. In addition to presenting the rationale behind ESGPred and detailing its ESG score prediction process, we show that ESGPred can effectively predict both overall ESG ratings and their individual Environmental, Social, and Governance components. We evaluated ESGPred using a dataset of 5,266 sustainability reports published by 2,134 publicly listed companies between 2020 and 2023. In this evaluation, we used ESG ratings provided by LSEG Data & Analytics as ground truth. Our experimental results demonstrated that integrating graph-based relational learning improves prediction performance over purely text-based baselines.
https://arxiv.org/abs/2611.16831
Autonomous greenhouse management increasingly requires robotic systems that integrate perception, navigation, environmental regulation, and plant-level intervention. This paper presents AgriSense, a framework combining an Isaac Sim virtual greenhouse, a quadruped mobile manipulator, RGB and LiDAR-inertial sensing, environmental control, and supervised vision-language decision support. Frozen DINOv2 and BERT encoders, together with structured environmental inputs, support joint prediction of twelve environmental references, a target zone, and an intervention flag. Checkpoint replay reproduces 41/43 zone decisions. Across five seeds on a source-grouped test set, the full, image-removed, and language-removed configurations each achieve 43/44 correct zone decisions, providing no evidence of incremental multimodal zone-accuracy improvement. The full model achieves mean absolute errors of 0.249 degrees C for temperature, 2.030 percentage points for humidity, and 0.997 percentage points for soil moisture. Sensor-only inputs match full-model zone accuracy, while language-only inputs achieve 68.64%. External real-image benchmarks reveal distribution-shift limitations. Five offline Point-LIO routes yield rigidly aligned trajectory errors of 5.22-17.32 mm. Of 40 virtual-arm targets, 32 satisfy geometric acceptance criteria and eight are rejected at boundaries. Six long-horizon climate cases and fault protocols characterize integration limits. Navigation and integrated treatment rely on simulator-state inputs; physical greenhouse performance and agronomic treatment efficacy remain unvalidated. The contribution is an evaluated decision-support and robotic-intervention framework for a virtual greenhouse.
https://arxiv.org/abs/2611.16752
This paper proposes the Data-to-Wisdom Epistemic Architecture for AI (EAAI), a conceptual framework treating Data, Information, Knowledge, Understanding and Wisdom as five distinct but recursively interacting epistemic functions: observation, contextual interpretation, modeling and prediction, critical evaluation and informed judgment. Two observations motivate it: sequential readings of the Knowledge Pyramid obscure how these functions interact, and a targeted review of ten Bayesian reference books finds that prior distributions are defined mathematically while "prior information" and "prior knowledge" are not consistently distinguished as epistemic categories. A Bayesian interpretation relates the likelihood, prior and posterior distributions, posterior prediction, model checking and decision analysis to the five functions, without limiting EAAI to Bayesian systems. Extending "prior" in an epistemic sense, the paper distinguishes five kinds of prior context that can shape the model, the likelihood, the prior, evaluation and action. Three worked applications -- quantitative financial risk, actuarial modeling in health insurance and agentic AI for medical reimbursement claims -- show how EAAI structures the analysis of model assumptions, evidence interpretation, validation, dependencies and decision consequences, separating the prediction of a risk, the appraisal of its reliability and the justification of action. It draws implications for AI and machine learning, including evaluation by function, treating intermediate model outputs as evidence open to challenge and separating generation from appraisal, and compares EAAI with work on DIKW, Bayesian workflow, AI evaluation and risk governance. Its contributions are an epistemic vocabulary with recursive relationships, a more accessible reading of Bayesian methodology, a typology of prior context and clearer methodological terminology.
https://arxiv.org/abs/2611.16726
Temporal link prediction is critical for understand- ing dynamic interactions in evolving networks, informing appli- cations ranging from social network analysis to recommendation systems. Existing methods typically rely on raw temporal graph data, often neglecting explicit edge-change information that can significantly improve predictive performance. To address this gap, we propose edge-gradient reinforced learning (EG-RL), a framework that explicitly encodes edge-gradient events (edge births and deaths) through dedicated node and link encoding modules. EG-RL uses a policy-driven reinforcement-learning mechanism to dynamically select and augment the most infor- mative edge snapshots, guided by critic-based feedback to opti- mize prediction accuracy. The model comprises distinct modules for node encoding, link encoding, token mixing, and channel mixing, integrated through global pooling and followed by a two-layer multilayer perceptron classifier. Extensive experiments on multiple dynamic graph datasets demonstrate substantial gains in area under the receiver operating characteristic curve and average precision. Ablation studies further confirm the necessity of adaptive edge-gradient augmentation and validate the effectiveness of the proposed encoding and reinforcement- learning mechanisms.
https://arxiv.org/abs/2611.16678
Decoding upper-limb movements from scalp electroencephalography (EEG) is an important problem for brain-computer interfaces (BCIs), but many deep learning models provide limited insight into the brain regions underlying their predictions. We propose a two-branch architecture that combines an LGGNet-inspired local-global graph branch with an EEGNet-style convolutional branch for movement-versus-rest classification. The graph branch groups 61 EEG electrodes into anatomically informed regions and learns their spatial relationships, providing a direct representation of the regions emphasized by the model. We evaluate the proposed architecture using leave-one-subject-out cross-validation on the Ofner upper-limb movement dataset. The model achieves a mean F1-score of 0.74 +/- 0.06 across subjects. Beyond classification performance, we analyze the learned graph structure to identify the regions with the strongest connectivity. Across all held-out subjects, the highest connectivity is consistently observed in the Parietal Left Low region, corresponding to electrodes P1 and P3. This region is opposite to the performed right-arm movements and lies within the posterior parietal area previously associated with upper-limb movement processing. These results show that incorporating a region-based graph into the decoder can provide an anatomically interpretable representation while maintaining effective movement classification, offering a practical approach toward more transparent EEG-based BCIs.
https://arxiv.org/abs/2611.16609
Individualized dosing requires predicting how a patient's drug exposure would change under a different dose or schedule. However, a model that accurately predicts exposure at the current dose may not reliably predict what happens when treatment changes. We developed two neural models that learn pharmacokinetic dynamics from data without predefined pharmacokinetic equations. The first predicts exposure after a dose change, while the second also allows changes in dosing schedules. In simulations, the second model predicted exposure under new dosing schedules more accurately than competing neural models. On real data of kidney transplant recipients treated with tacrolimus, both models showed lower prediction errors than Bayesian estimation when predicting exposure at a later visit. These findings suggest that incorporating pharmacokinetic principles into neural models can improve predictions needed for individualized dosing.
https://arxiv.org/abs/2602.03215
This paper investigates whether Large Language Models can answer a personality questionnaire as a specific individual would. Given a user's social-media posts, the model completes the BFI-2-60 Big Five questionnaire as that user. The predicted responses are converted into trait scores and compared with the user's actual scores. We evaluate GPT-4, Gemma, Llama 3.1, and Mistral on the MyPersonality dataset. To determine whether predictions reflect information from the user's writing, we compare them with answers produced without user text and with values derived from general population tendencies. We measure prediction error across all users and separately for individuals with low, intermediate, and high trait scores. We also test whether an LLM can express an explicit personality profile when given only the target Big Five scores, without user text, and examine how predictions change as more text is provided. The results show that user text does not consistently improve performance. Models perform better near the middle of the trait distribution, while at the lower and upper ends they often remain close to central values or perform well at one end but poorly at the other. When given an explicit profile, GPT-4 most clearly translates trait information into consistent questionnaire responses, particularly for Extraversion and Neuroticism. Increasing context does not systematically reduce error: open-source models fluctuate more, whereas GPT-4 remains comparatively stable. Overall, the evaluated models do not consistently reproduce the questionnaire behavior of specific individuals.
https://arxiv.org/abs/2611.16586
Predicting every observation in a high-rate stream requires a model to finish before the next arrival. A large model may offer better predictions but miss that deadline. We propose RESYNC: the large model runs asynchronously, while a fast path updates its latest exact but stale latent state using the observations received since that state was computed and applies its unchanged prediction head. The updater learns from the frozen model's representations without task labels. Across one real and two synthetic streams and five architecture families, RESYNC beats the best compact or distilled alternative with a paired 95% interval above zero in all twelve dataset--architecture pairs with a material teacher advantage at anchor ages of 4--12 observations, and in eleven pairs at older tested ages up to 32. The share of the teacher's gain preserved remains complete on the real stream but is lower and generally declines with anchor age on the synthetic streams. In live replay with 1 ms arrivals, the synchronous large models cannot deliver any predictions on time while RESYNC serves at least 99.4% of arrivals within the interval, with 0.35--0.62 ms median latency on one CPU thread: around the same speed as or faster than the compact model, and 7.9--17.7$\times$ faster than synchronous large-model inference. RESYNC targets settings with background compute available but a strict per-observation response deadline.
https://arxiv.org/abs/2611.16523
Data-driven surrogate modeling has emerged as a powerful paradigm for accelerating computational fluid dynamics, and hierarchical U-shaped networks, which resemble the structure of classical Geometric Multigrid (GMG) methods, have become prevalent designs. Modern surrogates built on these designs achieve competitive accuracy at a fraction of the cost of numerical solvers; however, accurate prediction of complex flows remains challenging, and no existing architecture leads across them. In such networks, the multigrid analogy mainly concerns the multi-resolution topology, while their components largely follow common vision practice. To address this, this study introduces SUMNO, a multigrid neural operator for fluid flow fields on regular grids that spatially unrolls a V-cycle into a feed-forward U-shaped network. Parameter-free down- and upsampling stand in for restriction and prolongation, and additive skip connections for coarse-grid correction, with normalization-free transfer and skip pathways. Within this macro-architecture, convolutions are used at the fine and intermediate resolutions and shifted-window attention at the coarsest, whose window partitioning is generalized to handle periodicity independently per axis. Evaluated on unseen test configurations across four unsteady and steady flow benchmarks against five representative baselines, SUMNO is best in 5 of 7 settings and ranks second in the remaining two. It reduces the 10-step rollout MSE by about 30% relative to the strongest baseline, and outperforms three baselines with over 130 million parameters using 9.4 million parameters.
https://arxiv.org/abs/2611.16341
Knowledge of phase stability is the first requirement for materials design, and predicting the conditions under which new materials can be synthesized has become a key capability of self-driving laboratories (SDLs). For inorganic materials, notably alloys, these predictions come from thermodynamic databases built with the CALPHAD method. Building a database, however, requires expert judgment at many steps, and because these decisions are rarely recorded, others can use a database but cannot regenerate or update it. Machines can already collect the data, build a first model with machine-learned interatomic potentials and refine it against experiments. The assessment itself, the sequence of judgments that turns these parts into a reliable database, is still carried out by human experts. We argue that it can be automated reproducibly only if the expert knowledge behind an assessment is encoded in formal protocols, so that an assessment delivers a record of its construction and not only its parameters. We introduce ORCHID-SAGE, a standard that organizes this record into reproducible and automatable protocols. In this first attempt, applied to Cr-Ni, the database was regenerated from its record by a script on a second machine, by an AI agent working only through the Model Context Protocol (MCP) and by a refit from public sources only, with the same predictions. Recorded in this way, a database need no longer be fixed at publication but can be updated by AI agents as SDLs and other sources provide new evidence, while the judgment remains with people and on the record.
https://arxiv.org/abs/2611.16308
Looped Transformers increase effective depth by repeatedly applying a shared block, offering a parameter-efficient approach to language modeling. However, most existing works directly reuse each loop's output as the next's input, which can lead to hidden-state scale growth and perturbation amplification as recurrence deepens. We propose Rectified Looped Transformer (RLT), which redesigns feedback between loops using an interpolation schedule inspired by flow-based modeling. At each loop, RLT forms the next input by linearly interpolating between the current state and its prediction. Such interpolation distributes state changes across loops, encouraging a smoother trajectory from the initial input to the final output. Theoretical analysis proves that, under appropriate assumptions, RLT keeps state magnitudes uniformly bounded across loops and reduces the worst-case perturbation amplification. We evaluate RLT on language modeling corpora and downstream benchmarks. At matched training and inference depths, RLT consistently achieves lower perplexity than a standard looped Transformer, while exhibiting greater robustness to input perturbations and variance in inference depth. Consistent with the theoretical results, latent trajectory analysis shows that RLT maintains more stable hidden-state norms across loops, which also facilitates extrapolation-based decoding strategies. Notably, RLT achieves these gains without requiring additional trainable parameters or extra recurrent block evaluations, thus providing a simple yet more stable feedback mechanism for looped Transformers.
https://arxiv.org/abs/2611.16265
Large language models (LLMs) can generate fluent claims that are unsupported by a given source document, motivating accurate and efficient document-grounded factuality detection. Existing LLM-based evaluators often require repeated inference and incur high computational cost, whereas compact factuality detectors are efficient at inference time but commonly rely on large labeled or synthetically generated corpora. We propose CPIL (Cross-Paraphrastic Invariance Learning), a two-stage Siamese framework that converts a small labeled set into relational supervision without acquiring additional factuality labels. CPIL constructs positive pairs from distinct label-preserving paraphrastic views of the same document-claim instance and negative pairs from opposite-label examples associated with the same source document. It further introduces quantile-aware semi-hard negative mining, which derives a boundary from the positive-pair similarity distribution and balances informative negatives with broader coverage. In the two-stage training procedure, Stage 1 learns an encoder from these task-aware pairs, and Stage 2 jointly fine-tunes the encoder and a linear classification head for binary factuality prediction. At inference time, CPIL requires no paraphrase generation, pair construction, or Siamese comparison and uses only one encoder-classifier forward pass. On the 11-task LLM-AggreFact benchmark, CPIL-2% and CPIL-3% achieve macro-F1 scores of 81.04 and 81.60 while using only 2-3% of the FactCG-released labeled pool. Both settings outperform all compared compact detectors and two vanilla LLM references. Ablations and sensitivity analyses support the contributions of task-aware pair construction, dynamic negative mining, and multi-pivot paraphrasing.
https://arxiv.org/abs/2611.16264
Chemical mechanical planarization (CMP) is a critical semiconductor manufacturing process where material removal rate (MRR) is a key metric for process monitoring and advanced process control (APC). Virtual metrology enables MRR estimation from process time series signals, supporting run-to-run(R2R) control and process optimization while reducing reliance on physical metrology. Existing approaches typically rely on simplified linear assumptions or require handcrafted feature engineering. In this paper, we propose Global Regression Pretraining(GREP), a self-supervised, attention-based framework for CMP MRR prediction. GREP learns temporal representations from unlabeled sensor signals through global proxy-target regression, followed by supervised fine-tuning for MRR estimation. The framework is evaluated against a feature-engineered supervised baseline under three conditions: limited labeled data, sensor noise, and temporal process drift. Experiments on the PHM 2016 CMP dataset demonstrate competitive performance under limited labeled-data conditions, with improvements in selected cases and performance largely comparable to the baseline across different labeled-data fractions. Both models exhibit relatively small changes in prediction error with increasing noise, while GREP achieves a 17.0% RMSE reduction in the final temporal interval.
https://arxiv.org/abs/2611.16172
Subsurface schematisation supports geotechnical decisions but remains challenging because sparse site-investigation data leave substantial gaps in information about ground conditions. This study explores TabPFN, a foundation model pretrained on general synthetic tabular data, for this task. Using only grid coordinates and soil behaviour type index observations from sparse cone penetration tests (CPTs), we first reconstruct two-dimensional sections without geotechnical fine-tuning or predefined layer boundaries. We evaluate the approach on synthetic sections and at two field sites in the Netherlands, comparing it with SchemaGAN, a conditional generative adversarial network trained on synthetic geotechnical sections, and with reference interpolation methods. In the baseline comparisons, TabPFN achieved mean errors close to SchemaGAN's on synthetic sections and lower mean errors at both field sites. On synthetic sections, TabPFN's mean absolute error decreased at each tested increase in CPT count, and, under the baseline input setting, its pointwise prediction intervals had mean coverage close to nominal levels. Subsequent fine-tuning on the synthetic sections used to train SchemaGAN improved synthetic test accuracy but increased mean errors at both field sites. These findings indicate that general-purpose tabular foundation models offer a promising route for updating subsurface predictions from sparse and evolving site-investigation data without retraining.
https://arxiv.org/abs/2611.16088